PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075948.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 306aa    MW: 33367.8 Da    PI: 8.5744
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.3e-3940101263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     ke+al+cprC stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_011075948.1  40 KEQALNCPRCSSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 101
                     7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-303398IPR003851Zinc finger, Dof-type
PfamPF027011.1E-334298IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.0964498IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104682IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDTAQWPQGI GVANVKAVVD HHQNPRPAGG TDQKKPRPQK EQALNCPRCS STNTKFCYYN  60
NYSLSQPRYF CKTCRRYWTE GGSLRNVPVG GGSRKNKRSS SSTTSAHVST SINSSGSSKK  120
VLPDLTPPNF SPHQNPKIHE GQDLNLAYNP SHLINGVSEF HVALPFGLDT KNLNINPQTQ  180
NPSSHHLPVM EFLKSSTTAT AGNMSSRGLM SSFMSIPVSD CSNSVYSSSA FPVHEFKPSL  240
GFSLDGLDQS GYNTNGLEDH SNPSSRILFP FEELKTVSSN EFEQDRSGQG GDSNGYWNGM  300
LAGGSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075948.10.0PREDICTED: dof zinc finger protein DOF4.6-like
TrEMBLF6H7D01e-94F6H7D0_VITVI; Putative uncharacterized protein
STRINGVIT_16s0098g01420.t014e-94(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.12e-53Dof family protein